Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
PCDH1Q08174 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
PCDH1Q08174 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
PCDH1Q08174 AC004898.1-201ENST00000451057 766 ntBASIC13.71□□□□□ -0.21
PCDH1Q08174 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDH1Q08174 AC116345.2-201ENST00000512837 523 ntBASIC13.71□□□□□ -0.21
PCDH1Q08174 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
PCDH1Q08174 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDH1Q08174 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.71□□□□□ -0.21
PCDH1Q08174 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.71□□□□□ -0.21
PCDH1Q08174 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.71□□□□□ -0.21
PCDH1Q08174 AL008638.5-201ENST00000623814 1298 ntBASIC13.71□□□□□ -0.21
PCDH1Q08174 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC13.71□□□□□ -0.21
PCDH1Q08174 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDH1Q08174 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
PCDH1Q08174 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.71□□□□□ -0.21
PCDH1Q08174 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.71□□□□□ -0.21
PCDH1Q08174 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
PCDH1Q08174 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
PCDH1Q08174 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCDH1Q08174 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
PCDH1Q08174 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.71□□□□□ -0.22
PCDH1Q08174 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
PCDH1Q08174 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
PCDH1Q08174 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
PCDH1Q08174 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AC027612.1-201ENST00000445234 2395 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AL391647.1-201ENST00000395664 511 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 EIF4HP1-201ENST00000453115 687 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDH1Q08174 CHCHD2P2-201ENST00000503744 321 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 AC005740.2-201ENST00000511085 419 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDH1Q08174 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
PCDH1Q08174 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
PCDH1Q08174 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 DGCR9-201ENST00000609630 2415 ntBASIC13.7□□□□□ -0.22
PCDH1Q08174 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
PCDH1Q08174 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC13.7□□□□□ -0.22
PCDH1Q08174 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
PCDH1Q08174 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
PCDH1Q08174 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDH1Q08174 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDH1Q08174 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDH1Q08174 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDH1Q08174 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.69□□□□□ -0.22
PCDH1Q08174 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PCDH1Q08174 AC025183.3-201ENST00000623526 1482 ntBASIC13.69□□□□□ -0.22
PCDH1Q08174 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PCDH1Q08174 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms