Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
EFNB1P98172 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
EFNB1P98172 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC12.64□□□□□ -0.39
EFNB1P98172 AC008735.3-201ENST00000596646 500 ntBASIC12.64□□□□□ -0.39
EFNB1P98172 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.64□□□□□ -0.39
EFNB1P98172 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.64□□□□□ -0.39
EFNB1P98172 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
EFNB1P98172 AL021155.1-201ENST00000438808 2637 ntBASIC12.64□□□□□ -0.39
EFNB1P98172 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 SLC39A11-201ENST00000255559 2737 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 RBM25-204ENST00000526754 1567 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
EFNB1P98172 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC12.64□□□□□ -0.39
EFNB1P98172 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
EFNB1P98172 PPP1R8-203ENST00000373931 2651 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
EFNB1P98172 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 BCL2L1-203ENST00000376062 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 MTSS1-201ENST00000325064 2777 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 AC098614.1-201ENST00000368528 745 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
EFNB1P98172 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 HNRNPA1P2-207ENST00000432375 960 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 AC003958.1-201ENST00000435883 421 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 XBP1P1-201ENST00000436573 652 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 BCRP1-201ENST00000444246 691 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
EFNB1P98172 AC092183.1-201ENST00000469884 875 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.63□□□□□ -0.39
EFNB1P98172 AHRR-211ENST00000515206 462 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.63□□□□□ -0.39
EFNB1P98172 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 AC005962.1-201ENST00000584100 773 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC12.63□□□□□ -0.39
EFNB1P98172 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC12.63□□□□□ -0.39
EFNB1P98172 RPL35-206ENST00000629845 340 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.63□□□□□ -0.39
EFNB1P98172 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC12.63□□□□□ -0.39
EFNB1P98172 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 AC021218.1-201ENST00000377722 2536 ntTSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
EFNB1P98172 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.63□□□□□ -0.39
EFNB1P98172 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
EFNB1P98172 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms