Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC044849.1-201ENST00000519737 1188 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 NKG7-204ENST00000595217 816 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AL359881.2-201ENST00000602973 570 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ABCD1P2-201ENST00000429313 1601 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H3AP68431 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC12.4□□□□□ -0.43
HIST1H3AP68431 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H3AP68431 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H3AP68431 AC025183.3-201ENST00000623526 1482 ntBASIC12.4□□□□□ -0.43
HIST1H3AP68431 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
HIST1H3AP68431 AC068760.1-201ENST00000493579 1953 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AL139158.3-201ENST00000641212 1562 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 SNORA50C-201ENST00000408535 133 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 NKAIN1P1-201ENST00000435754 582 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 RN7SL277P-201ENST00000481521 288 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 RCC2P8-201ENST00000502779 1035 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 AC116345.2-201ENST00000512837 523 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 PUDP-206ENST00000540122 825 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 SNORA50.1-201ENST00000628590 135 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 AL033527.4-201ENST00000641026 673 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AL359845.1-201ENST00000458202 1648 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
HIST1H3AP68431 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 KRT8P21-201ENST00000430398 1491 ntBASIC12.39□□□□□ -0.43
HIST1H3AP68431 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
HIST1H3AP68431 AC009474.1-201ENST00000455096 1565 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms