Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC15.99■□□□□ 0.15
TPM4P67936 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.99■□□□□ 0.15
TPM4P67936 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM4P67936 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 POM121L14P-201ENST00000406100 1558 ntBASIC15.99■□□□□ 0.15
TPM4P67936 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM4P67936 SEMA4D-212ENST00000450295 5684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM4P67936 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.98■□□□□ 0.15
TPM4P67936 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 AC061965.1-201ENST00000560524 1465 ntBASIC15.98■□□□□ 0.15
TPM4P67936 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 URGCP-206ENST00000446958 365 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC15.98■□□□□ 0.15
TPM4P67936 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 AC106820.3-201ENST00000561653 397 ntBASIC15.98■□□□□ 0.15
TPM4P67936 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 AC008825.2-201ENST00000603374 718 ntBASIC15.98■□□□□ 0.15
TPM4P67936 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.98■□□□□ 0.15
TPM4P67936 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC15.98■□□□□ 0.15
TPM4P67936 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM4P67936 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TPM4P67936 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 AC134312.5-201ENST00000568031 1313 ntBASIC15.97■□□□□ 0.15
TPM4P67936 DTX2P1-UPK3BP1-PMS2P11-203ENST00000636308 4646 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM4P67936 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TPM4P67936 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM4P67936 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 CICP12-201ENST00000455801 843 ntBASIC15.97■□□□□ 0.15
TPM4P67936 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.97■□□□□ 0.15
TPM4P67936 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.97■□□□□ 0.15
TPM4P67936 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.97■□□□□ 0.15
TPM4P67936 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM4P67936 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TPM4P67936 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TPM4P67936 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.97■□□□□ 0.15
TPM4P67936 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM4P67936 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM4P67936 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC15.97■□□□□ 0.15
TPM4P67936 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms