Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 FAM90A2P-201ENST00000511144 1395 ntBASIC13.51□□□□□ -0.25
SKP1P63208 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 FAM90A25P-201ENST00000528404 1395 ntBASIC13.51□□□□□ -0.25
SKP1P63208 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.51□□□□□ -0.25
SKP1P63208 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC13.51□□□□□ -0.25
SKP1P63208 ACTG1P2-201ENST00000415776 1125 ntBASIC13.51□□□□□ -0.25
SKP1P63208 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 ACTG1P11-201ENST00000425411 1125 ntBASIC13.51□□□□□ -0.25
SKP1P63208 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.51□□□□□ -0.25
SKP1P63208 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC13.51□□□□□ -0.25
SKP1P63208 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 AC012618.1-201ENST00000461223 412 ntBASIC13.51□□□□□ -0.25
SKP1P63208 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC13.51□□□□□ -0.25
SKP1P63208 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC13.51□□□□□ -0.25
SKP1P63208 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.51□□□□□ -0.25
SKP1P63208 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC13.51□□□□□ -0.25
SKP1P63208 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 AC091812.3-201ENST00000621362 345 ntBASIC13.51□□□□□ -0.25
SKP1P63208 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.51□□□□□ -0.25
SKP1P63208 AC117489.1-201ENST00000625169 3217 ntBASIC13.51□□□□□ -0.25
SKP1P63208 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SKP1P63208 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SKP1P63208 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.51□□□□□ -0.25
SKP1P63208 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 LINC01815-202ENST00000641468 1409 ntBASIC13.5□□□□□ -0.25
SKP1P63208 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 AC114947.1-202ENST00000514136 344 ntBASIC13.5□□□□□ -0.25
SKP1P63208 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC13.5□□□□□ -0.25
SKP1P63208 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC13.5□□□□□ -0.25
SKP1P63208 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.5□□□□□ -0.25
SKP1P63208 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.5□□□□□ -0.25
SKP1P63208 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.5□□□□□ -0.25
SKP1P63208 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SKP1P63208 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
SKP1P63208 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms