Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 CCDC186-201ENST00000369285 2035 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 MED24-204ENST00000394128 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 SHC1P1-201ENST00000425230 1745 ntBASIC12.74□□□□□ -0.37
VBP1P61758 FAM198B-207ENST00000592057 3425 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 PAX3-205ENST00000392069 3170 ntTSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 FN1-201ENST00000323926 8708 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 CTNS-201ENST00000046640 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.74□□□□□ -0.37
VBP1P61758 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 RPP21-221ENST00000428040 594 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC12.74□□□□□ -0.37
VBP1P61758 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.74□□□□□ -0.37
VBP1P61758 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 TIMM17BP1-201ENST00000545713 516 ntBASIC12.74□□□□□ -0.37
VBP1P61758 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 AC104692.2-201ENST00000603054 253 ntBASIC12.74□□□□□ -0.37
VBP1P61758 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 MIR6080-201ENST00000617359 66 ntBASIC12.74□□□□□ -0.37
VBP1P61758 AL603764.1-201ENST00000636452 321 ntBASIC12.74□□□□□ -0.37
VBP1P61758 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.74□□□□□ -0.37
VBP1P61758 RGS16-201ENST00000367558 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 KLHL12-203ENST00000367261 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 CHTF18-201ENST00000262315 3090 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
VBP1P61758 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 ASAH2B-202ENST00000374007 3715 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
VBP1P61758 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 ST3GAL2-202ENST00000393640 8872 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC12.74□□□□□ -0.37
VBP1P61758 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 ETAA1-201ENST00000272342 3418 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
VBP1P61758 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VBP1P61758 ARAF-203ENST00000377045 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 ELP2-221ENST00000542824 2288 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 AC025183.3-201ENST00000623526 1482 ntBASIC12.73□□□□□ -0.37
VBP1P61758 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
VBP1P61758 MKNK1-201ENST00000341183 2612 ntTSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 ARSEP1-201ENST00000420443 635 ntBASIC12.73□□□□□ -0.37
VBP1P61758 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.73□□□□□ -0.37
VBP1P61758 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC12.73□□□□□ -0.37
VBP1P61758 FAM210CP-201ENST00000445714 574 ntBASIC12.73□□□□□ -0.37
VBP1P61758 INE1-201ENST00000456273 945 ntBASIC12.73□□□□□ -0.37
VBP1P61758 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.73□□□□□ -0.37
VBP1P61758 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.73□□□□□ -0.37
VBP1P61758 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC12.73□□□□□ -0.37
VBP1P61758 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
VBP1P61758 MCM7-213ENST00000621318 3084 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 PPP1R26P2-201ENST00000611403 3595 ntBASIC12.73□□□□□ -0.37
VBP1P61758 LINC00846-201ENST00000334165 1778 ntTSL 2 BASIC12.73□□□□□ -0.37
VBP1P61758 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 ABI1-213ENST00000536334 3380 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 BAG6-247ENST00000439687 3104 ntTSL 2 BASIC12.73□□□□□ -0.37
VBP1P61758 CSNK1G1-209ENST00000634811 2592 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
VBP1P61758 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
VBP1P61758 NR1H3-201ENST00000395397 1501 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms