Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 APOC3-202ENST00000375345 604 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
SEC61A1P61619 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC12.55□□□□□ -0.4
SEC61A1P61619 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.55□□□□□ -0.4
SEC61A1P61619 AP003171.2-201ENST00000528208 925 ntBASIC12.55□□□□□ -0.4
SEC61A1P61619 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.55□□□□□ -0.4
SEC61A1P61619 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 DUX4L47-201ENST00000566374 394 ntBASIC12.55□□□□□ -0.4
SEC61A1P61619 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC12.55□□□□□ -0.4
SEC61A1P61619 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.55□□□□□ -0.4
SEC61A1P61619 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC12.55□□□□□ -0.4
SEC61A1P61619 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC12.55□□□□□ -0.4
SEC61A1P61619 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 OR10B1P-201ENST00000601666 907 ntBASIC12.55□□□□□ -0.4
SEC61A1P61619 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
SEC61A1P61619 TP73-201ENST00000346387 4854 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
SEC61A1P61619 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SEC61A1P61619 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 CD8B2-202ENST00000417670 633 ntBASIC12.54□□□□□ -0.4
SEC61A1P61619 FAM8A4P-201ENST00000435433 1213 ntBASIC12.54□□□□□ -0.4
SEC61A1P61619 AC108725.1-201ENST00000495472 409 ntBASIC12.54□□□□□ -0.4
SEC61A1P61619 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC12.54□□□□□ -0.4
SEC61A1P61619 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SEC61A1P61619 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.54□□□□□ -0.4
SEC61A1P61619 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SEC61A1P61619 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SEC61A1P61619 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms