Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 GH1-203ENST00000351388 685 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6P35125 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6P35125 AP001615.1-201ENST00000423276 461 ntTSL 3 BASIC18.64■□□□□ 0.57
USP6P35125 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC18.64■□□□□ 0.57
USP6P35125 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC18.64■□□□□ 0.57
USP6P35125 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC18.64■□□□□ 0.57
USP6P35125 AC020904.3-201ENST00000624199 442 ntBASIC18.64■□□□□ 0.57
USP6P35125 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
USP6P35125 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
USP6P35125 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
USP6P35125 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
USP6P35125 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 STK16-202ENST00000409260 1493 ntTSL 5 BASIC18.63■□□□□ 0.57
USP6P35125 KRT8P25-201ENST00000473150 1456 ntBASIC18.63■□□□□ 0.57
USP6P35125 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 NNMT-203ENST00000535401 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC18.63■□□□□ 0.57
USP6P35125 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 PTN-202ENST00000393083 1599 ntTSL 5 BASIC18.63■□□□□ 0.57
USP6P35125 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
USP6P35125 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 KRT8P38-201ENST00000441370 1430 ntBASIC18.63■□□□□ 0.57
USP6P35125 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
USP6P35125 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6P35125 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 BCL2L12P1-201ENST00000508390 733 ntBASIC18.63■□□□□ 0.57
USP6P35125 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6P35125 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6P35125 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC18.63■□□□□ 0.57
USP6P35125 AC006116.2-201ENST00000589958 988 ntBASIC18.63■□□□□ 0.57
USP6P35125 Metazoa_SRP.63-201ENST00000617144 298 ntBASIC18.63■□□□□ 0.57
USP6P35125 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 AL513497.1-201ENST00000624273 2083 ntBASIC18.63■□□□□ 0.57
USP6P35125 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC18.63■□□□□ 0.57
USP6P35125 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
USP6P35125 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
USP6P35125 AC046158.3-201ENST00000624947 2558 ntBASIC18.62■□□□□ 0.57
USP6P35125 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6P35125 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
USP6P35125 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP6P35125 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP6P35125 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
USP6P35125 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 NHP2P1-201ENST00000335274 462 ntBASIC18.62■□□□□ 0.57
USP6P35125 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6P35125 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC18.62■□□□□ 0.57
USP6P35125 HNRNPA1P10-201ENST00000444945 962 ntBASIC18.62■□□□□ 0.57
USP6P35125 AC015818.1-201ENST00000451011 244 ntBASIC18.62■□□□□ 0.57
USP6P35125 RN7SL684P-201ENST00000465665 294 ntBASIC18.62■□□□□ 0.57
USP6P35125 NDUFB2P1-201ENST00000506966 295 ntBASIC18.62■□□□□ 0.57
USP6P35125 OR4A49P-201ENST00000527050 632 ntBASIC18.62■□□□□ 0.57
USP6P35125 AC073896.4-201ENST00000553176 403 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6P35125 AC008735.2-201ENST00000589456 549 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6P35125 AC123912.6-201ENST00000612657 315 ntBASIC18.62■□□□□ 0.57
USP6P35125 AL138720.1-201ENST00000629853 778 ntTSL 5 BASIC18.62■□□□□ 0.57
USP6P35125 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
USP6P35125 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 LILRP2-202ENST00000413572 1383 ntBASIC18.62■□□□□ 0.57
USP6P35125 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC18.62■□□□□ 0.57
USP6P35125 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
USP6P35125 PROZ-201ENST00000342783 1551 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
USP6P35125 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC18.61■□□□□ 0.57
USP6P35125 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
USP6P35125 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
USP6P35125 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
USP6P35125 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
USP6P35125 RPSAP6-201ENST00000417882 882 ntBASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms