Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
VCANP13611 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCANP13611 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
VCANP13611 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCANP13611 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
VCANP13611 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
VCANP13611 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.15□□□□□ -0.14
VCANP13611 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VCANP13611 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 HNRNPA1P9-201ENST00000450624 950 ntBASIC14.15□□□□□ -0.14
VCANP13611 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 DNM1P17-201ENST00000512082 426 ntBASIC14.15□□□□□ -0.14
VCANP13611 AC011773.4-202ENST00000566000 1264 ntBASIC14.15□□□□□ -0.14
VCANP13611 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 AC046158.3-201ENST00000624947 2558 ntBASIC14.15□□□□□ -0.14
VCANP13611 ZNF384-204ENST00000396801 3008 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 STK16-202ENST00000409260 1493 ntTSL 5 BASIC14.15□□□□□ -0.14
VCANP13611 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC14.15□□□□□ -0.14
VCANP13611 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 TOP3B-202ENST00000398793 3107 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
VCANP13611 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 MIR197-201ENST00000384976 75 ntBASIC14.15□□□□□ -0.14
VCANP13611 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
VCANP13611 OAZ3-202ENST00000400999 890 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
VCANP13611 HLA-W-207ENST00000439514 771 ntBASIC14.15□□□□□ -0.14
VCANP13611 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC14.15□□□□□ -0.14
VCANP13611 NREP-218ENST00000509427 587 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
VCANP13611 AC013472.3-201ENST00000607407 659 ntBASIC14.15□□□□□ -0.14
VCANP13611 AL031673.1-201ENST00000611460 466 ntBASIC14.15□□□□□ -0.14
VCANP13611 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
VCANP13611 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC14.15□□□□□ -0.14
VCANP13611 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC14.15□□□□□ -0.15
VCANP13611 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.15
VCANP13611 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
VCANP13611 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC14.14□□□□□ -0.15
VCANP13611 NAV2-AS2-201ENST00000533767 782 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC14.14□□□□□ -0.15
VCANP13611 AC069366.2-201ENST00000583643 430 ntBASIC14.14□□□□□ -0.15
VCANP13611 AC136475.7-201ENST00000602949 592 ntBASIC14.14□□□□□ -0.15
VCANP13611 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VCANP13611 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.14□□□□□ -0.15
VCANP13611 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 CSF2RA-201ENST00000355432 1628 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 FLNC-AS1-201ENST00000469965 559 ntTSL 4 BASIC14.14□□□□□ -0.15
VCANP13611 CMC2-202ENST00000486645 766 ntTSL 3 BASIC14.14□□□□□ -0.15
VCANP13611 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 DHRS4L1-201ENST00000558293 855 ntTSL 5 BASIC14.14□□□□□ -0.15
VCANP13611 AC005336.1-201ENST00000585431 1243 ntBASIC14.14□□□□□ -0.15
VCANP13611 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 AL008719.1-201ENST00000430449 473 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 AC096919.1-201ENST00000472730 652 ntBASIC14.14□□□□□ -0.15
VCANP13611 OR52P2P-201ENST00000527287 955 ntBASIC14.14□□□□□ -0.15
VCANP13611 AC121757.1-201ENST00000552441 624 ntTSL 5 BASIC14.14□□□□□ -0.15
VCANP13611 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VCANP13611 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.14□□□□□ -0.15
VCANP13611 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms