Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 AC123567.1-201ENST00000548294 1261 ntBASIC15.99■□□□□ 0.15
TPM3P06753 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 AC009486.1-201ENST00000569860 813 ntBASIC15.99■□□□□ 0.15
TPM3P06753 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.99■□□□□ 0.15
TPM3P06753 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM3P06753 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.99■□□□□ 0.15
TPM3P06753 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
TPM3P06753 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TPM3P06753 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
TPM3P06753 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.99■□□□□ 0.15
TPM3P06753 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TPM3P06753 SLC5A5-201ENST00000222248 3576 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 PCDHB19P-202ENST00000625133 2914 ntBASIC15.98■□□□□ 0.15
TPM3P06753 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 AC004623.1-201ENST00000624592 2127 ntBASIC15.98■□□□□ 0.15
TPM3P06753 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM3P06753 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 MIR1233-2-201ENST00000408138 82 ntBASIC15.98■□□□□ 0.15
TPM3P06753 MIR1233-1-201ENST00000408722 82 ntBASIC15.98■□□□□ 0.15
TPM3P06753 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 BASP1P1-201ENST00000430708 665 ntBASIC15.98■□□□□ 0.15
TPM3P06753 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.98■□□□□ 0.15
TPM3P06753 AL162726.2-201ENST00000438986 1017 ntBASIC15.98■□□□□ 0.15
TPM3P06753 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC15.98■□□□□ 0.15
TPM3P06753 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.98■□□□□ 0.15
TPM3P06753 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 AP000593.2-201ENST00000542775 1433 ntBASIC15.98■□□□□ 0.15
TPM3P06753 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.98■□□□□ 0.15
TPM3P06753 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 TMEM261P1-201ENST00000604899 340 ntBASIC15.98■□□□□ 0.15
TPM3P06753 ENPP7P14-201ENST00000621765 1040 ntBASIC15.98■□□□□ 0.15
TPM3P06753 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 EML1-203ENST00000334192 4064 ntTSL 5 BASIC15.98■□□□□ 0.15
TPM3P06753 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC15.98■□□□□ 0.15
TPM3P06753 AC002350.2-201ENST00000623894 1828 ntBASIC15.98■□□□□ 0.15
TPM3P06753 PCDHA6-201ENST00000378126 3267 ntBASIC15.98■□□□□ 0.15
TPM3P06753 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
TPM3P06753 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TPM3P06753 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM3P06753 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC15.97■□□□□ 0.15
TPM3P06753 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 LINC00567-201ENST00000569854 3409 ntBASIC15.97■□□□□ 0.15
TPM3P06753 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 POM121L8P-201ENST00000417732 1281 ntBASIC15.97■□□□□ 0.15
TPM3P06753 DFFBP1-201ENST00000433250 979 ntBASIC15.97■□□□□ 0.15
TPM3P06753 POM121L9P-203ENST00000441984 1285 ntBASIC15.97■□□□□ 0.15
TPM3P06753 CDC23-208ENST00000505120 455 ntTSL 3 BASIC15.97■□□□□ 0.15
TPM3P06753 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.97■□□□□ 0.15
TPM3P06753 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC15.97■□□□□ 0.15
TPM3P06753 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TPM3P06753 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms