Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 VAMP2-201ENST00000316509 2153 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.19□□□□□ -0.46
TMEM235A6NFC5 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 ATXN2L-205ENST00000395547 3981 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TMEM235A6NFC5 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 TDG-209ENST00000544861 1387 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 PHB-210ENST00000511832 1509 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 MIR1233-2-201ENST00000408138 82 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 MIR1233-1-201ENST00000408722 82 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 DFFBP1-201ENST00000433250 979 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 METTL21AP1-201ENST00000438852 635 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CICP12-201ENST00000455801 843 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 RERG-204ENST00000536465 2134 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC106820.3-201ENST00000561653 397 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC002472.3-201ENST00000640124 621 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC026271.4-201ENST00000578214 1833 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 AC060814.4-201ENST00000594169 2163 ntBASIC12.18□□□□□ -0.46
TMEM235A6NFC5 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
TMEM235A6NFC5 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 EFHC2-202ENST00000420999 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 MTHFSD-204ENST00000546093 2451 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 TUBB4AP1-201ENST00000450755 1325 ntBASIC12.17□□□□□ -0.46
TMEM235A6NFC5 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.17□□□□□ -0.46
TMEM235A6NFC5 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms