Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.9□□□□□ -0.19
RNF11Q9Y3C5 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
RNF11Q9Y3C5 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
RNF11Q9Y3C5 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
RNF11Q9Y3C5 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AC087386.2-201ENST00000623212 4637 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 CHEK2-201ENST00000328354 1867 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 FAM58BP-201ENST00000439056 645 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 YBX1P6-201ENST00000442962 1002 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AC006122.1-201ENST00000493323 440 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AC119751.2-201ENST00000504529 210 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AC003686.1-201ENST00000550956 1034 ntBASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.89□□□□□ -0.19
RNF11Q9Y3C5 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC022210.1-201ENST00000449856 793 ntBASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC022217.1-201ENST00000521069 738 ntBASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 AC090386.2-201ENST00000623010 1039 ntBASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 NUTM2E-202ENST00000602967 3623 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC13.88□□□□□ -0.19
RNF11Q9Y3C5 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF11Q9Y3C5 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF11Q9Y3C5 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.87□□□□□ -0.19
RNF11Q9Y3C5 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
RNF11Q9Y3C5 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC13.87□□□□□ -0.19
RNF11Q9Y3C5 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
RNF11Q9Y3C5 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms