Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC11.68□□□□□ -0.54
RCL1Q9Y2P8 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.68□□□□□ -0.54
RCL1Q9Y2P8 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC015712.2-201ENST00000560351 3688 ntTSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 ACVR2A-201ENST00000241416 5728 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 CAMKK2-204ENST00000392473 2967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MAT2B-204ENST00000518095 3409 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 GRM1-202ENST00000355289 3874 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MST1R-201ENST00000296474 4536 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 KLF2P3-201ENST00000451977 1087 ntBASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC109322.1-201ENST00000524499 1264 ntBASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC140878.1-201ENST00000565277 250 ntBASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC009407.1-201ENST00000568958 598 ntBASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AC027612.4-201ENST00000605371 583 ntBASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 VSTM2A-201ENST00000302287 3401 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 MYRIP-203ENST00000425621 2981 ntTSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 RAB42-201ENST00000373826 1950 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC11.67□□□□□ -0.54
RCL1Q9Y2P8 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 NRXN1-259ENST00000637511 3651 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CLUHP2-201ENST00000426660 1303 ntBASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 RGS12-201ENST00000336727 4674 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 AC124283.3-201ENST00000570869 594 ntBASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 AC004790.1-201ENST00000612686 536 ntBASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 AL590560.3-201ENST00000623350 461 ntBASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
RCL1Q9Y2P8 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms