Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AL354707.1-201ENST00000615168 2013 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 RN7SKP214-201ENST00000364208 315 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 CYP46A4P-201ENST00000414953 267 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 Z97180.1-201ENST00000445173 988 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 RN7SL818P-201ENST00000485099 259 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AC140658.4-201ENST00000561990 352 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 MIR3908-201ENST00000579798 126 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 MIR4750-201ENST00000584564 56 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 RN7SL725P-201ENST00000606439 259 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 AL731571.1-201ENST00000617058 5428 ntBASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CUEDC1Q9NWM3 PPCDC-201ENST00000342932 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ACTG1P2-201ENST00000415776 1125 ntBASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ACTG1P11-201ENST00000425411 1125 ntBASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TSPY25P-201ENST00000429463 745 ntBASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 RN7SL277P-201ENST00000481521 288 ntBASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 CCNC-217ENST00000523985 958 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 LINC01165-201ENST00000445190 1623 ntBASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TUBBP5-203ENST00000508529 1334 ntBASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
CUEDC1Q9NWM3 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
CUEDC1Q9NWM3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms