Protein–RNA interactions for Protein: Q9HCJ0

TNRC6C, Trinucleotide repeat-containing gene 6C protein, humanhuman

Known RBP Predictions only

Length 1,690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6CQ9HCJ0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 ERCC4-207ENST00000575156 2073 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 RN7SKP212-201ENST00000410851 328 ntBASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 KRT18P44-201ENST00000416086 1285 ntBASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 KRT19P4-201ENST00000443208 943 ntBASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 MST1L-204ENST00000545160 559 ntTSL 4 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SULT1A3-206ENST00000563322 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SULT1A4-204ENST00000565290 906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 KRTAP10-4-202ENST00000616689 597 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 DAO-208ENST00000551281 1345 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 LINC00967-203ENST00000518035 1502 ntTSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNRC6CQ9HCJ0 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 HDGF-202ENST00000368206 960 ntTSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AL359092.2-201ENST00000423330 585 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AK2P2-201ENST00000439142 405 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 RNASEH2CP1-201ENST00000454281 502 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AC007292.1-201ENST00000594444 746 ntTSL 2 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AL356740.1-201ENST00000602192 1297 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 ARCN1-204ENST00000534182 1669 ntTSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 MST1P2-201ENST00000457982 2291 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AC061965.1-201ENST00000560524 1465 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 USP44-202ENST00000393091 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 LYRM1-202ENST00000396052 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 GOLGA8VP-201ENST00000559009 1798 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 HNRNPA3P12-201ENST00000437410 1063 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 FAM86JP-202ENST00000484500 988 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 RN7SL480P-201ENST00000581481 294 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 AL590556.2-202ENST00000636906 844 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 RPL4P6-201ENST00000438116 1304 ntBASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TNRC6CQ9HCJ0 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 KRT8P38-201ENST00000441370 1430 ntBASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TNRC6CQ9HCJ0 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms