Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 SCARNA21-201ENST00000517026 139 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 AL512310.5-201ENST00000551999 515 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 COG4-212ENST00000564653 590 ntTSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 DUX4L45-201ENST00000566406 1057 ntBASIC17■□□□□ 0.31
UPF3BQ9BZI7 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 TSN-212ENST00000536142 3328 ntTSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 SAMD15-201ENST00000216471 2564 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
UPF3BQ9BZI7 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
UPF3BQ9BZI7 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 PCDHA6-201ENST00000378126 3267 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 GOLGA2P4-201ENST00000441462 777 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 HSPB1P2-201ENST00000448722 546 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 RNMTL1P1-201ENST00000454103 560 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 RPSAP36-202ENST00000494591 1261 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 AC004241.5-201ENST00000623870 2448 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 AC018629.1-201ENST00000623381 1736 ntBASIC16.99■□□□□ 0.31
UPF3BQ9BZI7 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 LINC00115-201ENST00000473798 1317 ntBASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC16.98■□□□□ 0.31
UPF3BQ9BZI7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms