Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AC007389.4-201ENST00000454674 793 ntBASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AC008735.3-201ENST00000596646 500 ntBASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 PRKCH-201ENST00000332981 3582 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AL359845.1-201ENST00000458202 1648 ntBASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 DNAJA4-203ENST00000394855 3245 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PTCHD3-201ENST00000438700 2529 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 FBXL18-201ENST00000382368 3498 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC016694.1-201ENST00000434179 700 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 CHMP1AP1-201ENST00000445563 662 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 HIST2H2BB-201ENST00000449108 381 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 POLD4-211ENST00000539074 714 ntTSL 3 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 KRT90P-201ENST00000549264 1064 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC021016.3-201ENST00000608367 477 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 ZACNP1-201ENST00000612259 710 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC009474.1-201ENST00000455096 1565 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 NEK4-207ENST00000535191 2452 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 CCT8L1P-201ENST00000465400 1674 ntBASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
HDHD3Q9BSH5 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms