Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 SRP72-205ENST00000510663 2473 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 LAS1L-201ENST00000374804 2261 ntTSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 DGKZ-204ENST00000454345 4086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AC073335.2-201ENST00000610177 3441 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 DPEP2-202ENST00000393847 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 KIF3A-208ENST00000618515 3333 ntTSL 5 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 RN7SKP230-201ENST00000365642 335 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 GPS2P2-201ENST00000430745 888 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 FAM210CP-201ENST00000445714 574 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 RN7SL618P-201ENST00000477850 296 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TPM1-226ENST00000560959 925 ntTSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AC005586.2-201ENST00000563946 837 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 SLC25A6P4-201ENST00000586535 553 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AC004466.1-201ENST00000599515 1080 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AC104692.2-201ENST00000603054 253 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 LINC02084-201ENST00000606069 1096 ntBASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AC237221.1-202ENST00000563054 2947 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 SMG9-201ENST00000270066 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 ZNF573-204ENST00000392138 2266 ntTSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 INTS6L-201ENST00000370752 3793 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 TMEM25-208ENST00000524725 2630 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 PEX12-201ENST00000225873 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SEC22CQ9BRL7 AL031432.4-201ENST00000641729 2190 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 IQUB-202ENST00000466202 3296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AL645608.3-201ENST00000448179 3043 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PIGG-208ENST00000504346 3019 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 GNAS-214ENST00000371100 4029 ntTSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC023274.1-201ENST00000418278 595 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 EIF3FP3-201ENST00000434851 1086 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 SDHAP3-202ENST00000515467 728 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC027237.1-201ENST00000560942 655 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC090617.6-201ENST00000572790 443 ntTSL 3 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 MIR6080-201ENST00000617359 66 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 BX539320.1-201ENST00000623759 877 ntBASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 PES1-205ENST00000405677 2708 ntTSL 2 BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SEC22CQ9BRL7 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms