Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
CCDC107Q8WV48 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CCDC107Q8WV48 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CCDC107Q8WV48 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
CCDC107Q8WV48 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.43
CCDC107Q8WV48 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 AC134312.5-201ENST00000568031 1313 ntBASIC12.39□□□□□ -0.43
CCDC107Q8WV48 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 TDH-203ENST00000531764 1110 ntBASIC12.39□□□□□ -0.43
CCDC107Q8WV48 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 AC145423.3-201ENST00000615987 467 ntBASIC12.39□□□□□ -0.43
CCDC107Q8WV48 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 ITGAX-201ENST00000268296 4703 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SMARCA2-209ENST00000382203 5867 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SULF1-202ENST00000402687 4891 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
CCDC107Q8WV48 AL138725.1-201ENST00000407347 1314 ntBASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TNRC18P1-201ENST00000502875 3650 ntBASIC12.38□□□□□ -0.43
CCDC107Q8WV48 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 AP000437.1-201ENST00000624057 2085 ntBASIC12.38□□□□□ -0.43
CCDC107Q8WV48 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 SLC4A5-206ENST00000423644 6185 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TERF1P3-201ENST00000505638 1227 ntBASIC12.38□□□□□ -0.43
CCDC107Q8WV48 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCDC107Q8WV48 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms