Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AL590824.1-201ENST00000403828 1349 ntBASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AC011491.1-203ENST00000637688 543 ntBASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AL139424.3-202ENST00000641619 917 ntBASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
SHROOM3Q8TF72 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 MIR3677-201ENST00000578964 60 ntBASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AL133467.4-201ENST00000602953 725 ntBASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 SNORA50C-201ENST00000408535 133 ntBASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AL139008.1-201ENST00000437894 228 ntBASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 MSRA-203ENST00000441698 788 ntTSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 Z97180.1-201ENST00000445173 988 ntBASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AC012618.1-201ENST00000461223 412 ntBASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC14.4□□□□□ -0.1
SHROOM3Q8TF72 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms