Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 SLC9A7P1-201ENST00000554295 3311 ntBASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 U3.41-201ENST00000408711 219 ntBASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 RFNG-202ENST00000429557 994 ntTSL 5 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 HLA-W-207ENST00000439514 771 ntBASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 AC113398.1-201ENST00000464124 406 ntBASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 TRBV11-2-201ENST00000471935 408 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 IQSEC2-205ENST00000498281 673 ntTSL 3 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 C17orf62-234ENST00000584503 584 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 AC105917.1-201ENST00000506637 2539 ntBASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 FAM157C-201ENST00000563357 1806 ntTSL 2 BASIC17.7■□□□□ 0.42
PTF1AQ7RTS3 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 KRT8P25-201ENST00000473150 1456 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 EML1-203ENST00000334192 4064 ntTSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 KRT8P42-201ENST00000405771 1399 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 RBP4-203ENST00000371469 814 ntTSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 IGLJ1-201ENST00000390320 127 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 ASLP1-201ENST00000428790 637 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 RBPMSLP-201ENST00000433427 502 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 RPSAP16-201ENST00000447583 821 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AC022001.3-201ENST00000606330 596 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AC008622.3-201ENST00000621170 600 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AC137723.2-201ENST00000623540 398 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 NRADDP-202ENST00000641269 1585 ntBASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 WARS-203ENST00000358655 2466 ntTSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
PTF1AQ7RTS3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 HSPA8P5-201ENST00000456928 2069 ntBASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 TP63-206ENST00000392463 1386 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 TCEAL5-201ENST00000372680 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 AC015818.1-201ENST00000451011 244 ntBASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 NAT9-204ENST00000578822 839 ntTSL 3 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 AC009812.1-201ENST00000605948 1059 ntBASIC17.68■□□□□ 0.42
PTF1AQ7RTS3 AL353581.1-201ENST00000606916 1224 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 170.5 ms