Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 RN7SL769P-201ENST00000469386 295 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 RN7SL277P-201ENST00000481521 288 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 AL133499.1-201ENST00000596207 608 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 AC104506.1-201ENST00000609247 429 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 AC079336.7-201ENST00000623428 1078 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CR383656.2-201ENST00000548656 2254 ntBASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RFWD3Q6PCD5 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ANKMY1-206ENST00000401804 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 NDRG4-255ENST00000570248 3207 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ANO7-202ENST00000402430 2652 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AL353637.1-201ENST00000451571 732 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 MIR4754-201ENST00000582477 89 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AL022334.2-201ENST00000610000 484 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 MIR6769A-201ENST00000617340 73 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AC015967.2-201ENST00000624092 234 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AC006435.4-201ENST00000625037 234 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AL356737.1-201ENST00000634391 234 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 SLC22A20-202ENST00000525437 3196 ntTSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 HSPA8P5-201ENST00000456928 2069 ntBASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
RFWD3Q6PCD5 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 OR2K2-202ENST00000374428 1038 ntBASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 ELK2AP-201ENST00000392510 1007 ntBASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC14.84□□□□□ -0.03
RFWD3Q6PCD5 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms