Protein–RNA interactions for Protein: Q3KP44

ANKRD55, Ankyrin repeat domain-containing protein 55, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD55Q3KP44 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC008738.7-201ENST00000609744 511 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC116165.1-201ENST00000611806 668 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC015819.3-201ENST00000624305 2674 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 AC009093.10-201ENST00000641956 1442 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 TUBB4AP1-201ENST00000450755 1325 ntBASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
ANKRD55Q3KP44 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 TMOD1-201ENST00000259365 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 CDK12-201ENST00000430627 5918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 MRPS18AP1-201ENST00000414458 589 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AC104596.2-201ENST00000512793 793 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AC055876.2-201ENST00000531834 546 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 TPRX2P-201ENST00000535362 881 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 RRP7BP-205ENST00000566851 833 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AC004790.1-201ENST00000612686 536 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AP005019.2-201ENST00000615104 511 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 CR392039.2-201ENST00000623182 509 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AL023775.1-201ENST00000454907 1746 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 AC009093.2-202ENST00000620513 2079 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 ADAM8-201ENST00000415217 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 FKBP4P6-201ENST00000457486 1332 ntBASIC11.85□□□□□ -0.51
ANKRD55Q3KP44 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 OS9-203ENST00000389142 2457 ntTSL 5 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 RRBP1-206ENST00000455029 2485 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 AC073862.5-201ENST00000624129 2027 ntBASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 SPDYE19P-201ENST00000338590 713 ntBASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
ANKRD55Q3KP44 METTL26-204ENST00000397665 558 ntTSL 2 BASIC11.84□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms