Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCDC27Q2M243 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCDC27Q2M243 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC27Q2M243 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CCDC27Q2M243 AC073548.1-201ENST00000624088 1882 ntBASIC18.33■□□□□ 0.53
CCDC27Q2M243 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
CCDC27Q2M243 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC27Q2M243 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CCDC27Q2M243 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC18.33■□□□□ 0.53
CCDC27Q2M243 Z98885.3-201ENST00000624882 1757 ntBASIC18.33■□□□□ 0.53
CCDC27Q2M243 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 BCYRN1-201ENST00000418539 200 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 RPL8P2-201ENST00000430538 502 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AC234782.1-201ENST00000451950 919 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AC132825.4-202ENST00000578792 434 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 AC084346.2-201ENST00000607097 949 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AC007718.1-201ENST00000621078 280 ntBASIC18.33■□□□□ 0.52
CCDC27Q2M243 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC18.33■□□□□ 0.52
CCDC27Q2M243 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CCDC27Q2M243 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 NSD2-209ENST00000436793 835 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 AC007279.1-201ENST00000448547 837 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 AC018638.5-201ENST00000450885 754 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 RN7SL769P-201ENST00000469386 295 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 AL021578.1-201ENST00000613646 709 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 AC009474.1-201ENST00000455096 1565 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 NRADDP-202ENST00000641269 1585 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 HADH-202ENST00000403312 1752 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 AF013593.1-201ENST00000458074 1487 ntBASIC18.32■□□□□ 0.52
CCDC27Q2M243 RDX-218ENST00000544551 4117 ntTSL 2 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 DDC-204ENST00000426377 1700 ntTSL 3 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC18.32■□□□□ 0.52
CCDC27Q2M243 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CCDC27Q2M243 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CCDC27Q2M243 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms