Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
HIST1H3AP68431 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 PARVG-202ENST00000415224 999 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC004898.1-201ENST00000451057 766 ntBASIC12.41□□□□□ -0.42
HIST1H3AP68431 RHEB-207ENST00000496004 744 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SYT17-208ENST00000568433 812 ntTSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AL022334.2-201ENST00000610000 484 ntBASIC12.41□□□□□ -0.42
HIST1H3AP68431 ABBA01031663.1-201ENST00000635630 790 ntBASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 AC135782.3-201ENST00000562782 2105 ntBASIC12.41□□□□□ -0.42
HIST1H3AP68431 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 BRD7P5-201ENST00000299197 1822 ntBASIC12.41□□□□□ -0.42
HIST1H3AP68431 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SALL4P6-201ENST00000429385 1691 ntBASIC12.41□□□□□ -0.42
HIST1H3AP68431 RSBN1-201ENST00000261441 6621 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
HIST1H3AP68431 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
HIST1H3AP68431 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 LINC01165-201ENST00000445190 1623 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
HIST1H3AP68431 MIR1908-201ENST00000410394 80 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC104306.2-201ENST00000451877 341 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 AC125604.1-201ENST00000496255 707 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 CHCHD2P2-201ENST00000503744 321 ntBASIC12.4□□□□□ -0.42
HIST1H3AP68431 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.4□□□□□ -0.42
HIST1H3AP68431 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms