Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC15.35■□□□□ 0.05
SNRPFP62306 MIR557-201ENST00000385239 98 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 AC098934.1-203ENST00000442868 1262 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 AL133466.1-201ENST00000447582 150 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
SNRPFP62306 COQ10BP2-201ENST00000513804 724 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC15.35■□□□□ 0.05
SNRPFP62306 AC132825.4-202ENST00000578792 434 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
SNRPFP62306 CU633904.3-201ENST00000624042 1029 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.35■□□□□ 0.05
SNRPFP62306 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 AL359845.1-201ENST00000458202 1648 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
SNRPFP62306 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
SNRPFP62306 AC020917.4-201ENST00000623994 1999 ntBASIC15.35■□□□□ 0.05
SNRPFP62306 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC15.35■□□□□ 0.05
SNRPFP62306 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 AF013593.1-201ENST00000458074 1487 ntBASIC15.34■□□□□ 0.05
SNRPFP62306 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 AC005840.4-201ENST00000541242 2494 ntBASIC15.34■□□□□ 0.05
SNRPFP62306 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.34■□□□□ 0.05
SNRPFP62306 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 AC007279.1-201ENST00000448547 837 ntBASIC15.34■□□□□ 0.05
SNRPFP62306 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC15.34■□□□□ 0.05
SNRPFP62306 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.34■□□□□ 0.05
SNRPFP62306 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC15.34■□□□□ 0.05
SNRPFP62306 AC107871.2-202ENST00000563057 396 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 JPT2-214ENST00000569765 782 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.34■□□□□ 0.05
SNRPFP62306 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
SNRPFP62306 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC15.34■□□□□ 0.05
SNRPFP62306 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 AL358781.1-202ENST00000321081 1360 ntBASIC15.34■□□□□ 0.05
SNRPFP62306 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC15.34■□□□□ 0.05
SNRPFP62306 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.34■□□□□ 0.05
SNRPFP62306 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
SNRPFP62306 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
SNRPFP62306 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC15.33■□□□□ 0.05
SNRPFP62306 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
SNRPFP62306 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNRPFP62306 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
SNRPFP62306 TBC1D27-202ENST00000424239 1573 ntBASIC15.33■□□□□ 0.05
SNRPFP62306 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRPFP62306 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
SNRPFP62306 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRPFP62306 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRPFP62306 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.33■□□□□ 0.04
SNRPFP62306 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
SNRPFP62306 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
SNRPFP62306 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms