Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 LINC02486-201ENST00000604157 3000 ntBASIC12.82□□□□□ -0.36
SUMO3P55854 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC12.82□□□□□ -0.36
SUMO3P55854 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SUMO3P55854 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC12.82□□□□□ -0.36
SUMO3P55854 MIR645-201ENST00000385283 94 ntBASIC12.82□□□□□ -0.36
SUMO3P55854 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SUMO3P55854 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC12.82□□□□□ -0.36
SUMO3P55854 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 DUTP3-201ENST00000450025 415 ntBASIC12.82□□□□□ -0.36
SUMO3P55854 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.82□□□□□ -0.36
SUMO3P55854 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC12.82□□□□□ -0.36
SUMO3P55854 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 AC020922.3-201ENST00000595064 547 ntBASIC12.82□□□□□ -0.36
SUMO3P55854 AL021707.6-201ENST00000609212 491 ntBASIC12.82□□□□□ -0.36
SUMO3P55854 AL139099.5-201ENST00000635274 300 ntBASIC12.82□□□□□ -0.36
SUMO3P55854 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 C1R-201ENST00000535233 2211 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.82□□□□□ -0.36
SUMO3P55854 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.82□□□□□ -0.36
SUMO3P55854 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SUMO3P55854 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 AC067931.2-201ENST00000623655 2003 ntBASIC12.81□□□□□ -0.36
SUMO3P55854 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SUMO3P55854 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
SUMO3P55854 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 AL391647.1-201ENST00000395664 511 ntBASIC12.81□□□□□ -0.36
SUMO3P55854 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.81□□□□□ -0.36
SUMO3P55854 AL133466.1-201ENST00000447582 150 ntBASIC12.81□□□□□ -0.36
SUMO3P55854 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SUMO3P55854 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 AC242376.1-201ENST00000559033 726 ntBASIC12.81□□□□□ -0.36
SUMO3P55854 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
SUMO3P55854 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SUMO3P55854 CU633904.3-201ENST00000624042 1029 ntBASIC12.81□□□□□ -0.36
SUMO3P55854 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.81□□□□□ -0.36
SUMO3P55854 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.81□□□□□ -0.36
SUMO3P55854 MARK2P9-201ENST00000430958 1727 ntBASIC12.81□□□□□ -0.36
SUMO3P55854 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms