Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 PMM2-216ENST00000569958 698 ntTSL 2 BASIC15.28■□□□□ 0.04
BRCA2P51587 AC008622.3-201ENST00000621170 600 ntBASIC15.28■□□□□ 0.04
BRCA2P51587 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRCA2P51587 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 KRT18P45-201ENST00000515347 1333 ntBASIC15.27■□□□□ 0.04
BRCA2P51587 HRASLS2-201ENST00000255695 742 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 OAZ3-201ENST00000321531 851 ntTSL 5 BASIC15.27■□□□□ 0.04
BRCA2P51587 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 FAM213AP2-201ENST00000521579 683 ntBASIC15.27■□□□□ 0.04
BRCA2P51587 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BRCA2P51587 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
BRCA2P51587 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 AC005562.1-201ENST00000583030 3219 ntBASIC15.27■□□□□ 0.04
BRCA2P51587 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 LYRM4-205ENST00000464010 1401 ntTSL 3 BASIC15.27■□□□□ 0.04
BRCA2P51587 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.27■□□□□ 0.04
BRCA2P51587 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 MKNK1-205ENST00000428112 1270 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
BRCA2P51587 CST7-201ENST00000480798 930 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRCA2P51587 MED11-203ENST00000575284 652 ntTSL 3 BASIC15.27■□□□□ 0.04
BRCA2P51587 MIR4326-201ENST00000582203 59 ntBASIC15.27■□□□□ 0.04
BRCA2P51587 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
BRCA2P51587 MAFTRR-201ENST00000562921 1859 ntTSL 5 BASIC15.27■□□□□ 0.03
BRCA2P51587 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC15.27■□□□□ 0.03
BRCA2P51587 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
BRCA2P51587 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 AADACL4-201ENST00000376221 1575 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
BRCA2P51587 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 FTLP3-201ENST00000427242 528 ntBASIC15.27■□□□□ 0.03
BRCA2P51587 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC15.27■□□□□ 0.03
BRCA2P51587 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
BRCA2P51587 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC15.27■□□□□ 0.03
BRCA2P51587 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRCA2P51587 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.26■□□□□ 0.03
BRCA2P51587 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 LINC00638-201ENST00000555578 2518 ntBASIC15.26■□□□□ 0.03
BRCA2P51587 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 MGST3-204ENST00000367888 778 ntTSL 3 BASIC15.26■□□□□ 0.03
BRCA2P51587 MIR766-201ENST00000390223 111 ntBASIC15.26■□□□□ 0.03
BRCA2P51587 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 SERPINB8P1-201ENST00000401898 377 ntBASIC15.26■□□□□ 0.03
BRCA2P51587 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 CNBP-207ENST00000502976 1626 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 DEGS1-202ENST00000391877 1345 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 AC069277.1-201ENST00000433639 1083 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 AC079742.1-201ENST00000434951 357 ntTSL 3 BASIC15.26■□□□□ 0.03
BRCA2P51587 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.26■□□□□ 0.03
BRCA2P51587 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.26■□□□□ 0.03
BRCA2P51587 HERC2P5-202ENST00000564458 1164 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 HERC2P8-203ENST00000564795 1164 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
BRCA2P51587 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
BRCA2P51587 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.26■□□□□ 0.03
BRCA2P51587 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.26■□□□□ 0.03
BRCA2P51587 FGD5P1-202ENST00000614866 2498 ntBASIC15.26■□□□□ 0.03
BRCA2P51587 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.26■□□□□ 0.03
BRCA2P51587 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.26■□□□□ 0.03
BRCA2P51587 CAP2-207ENST00000493172 861 ntTSL 2 BASIC15.26■□□□□ 0.03
BRCA2P51587 FTH1-205ENST00000529631 507 ntTSL 4 BASIC15.26■□□□□ 0.03
BRCA2P51587 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC15.26■□□□□ 0.03
BRCA2P51587 AL158032.2-201ENST00000616818 195 ntBASIC15.26■□□□□ 0.03
BRCA2P51587 MCOLN3-201ENST00000341115 1762 ntTSL 2 BASIC15.26■□□□□ 0.03
BRCA2P51587 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
BRCA2P51587 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
BRCA2P51587 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.25■□□□□ 0.03
BRCA2P51587 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms