Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 C2orf69P2-201ENST00000562032 1123 ntBASIC12.68□□□□□ -0.38
SLC6A9P48067 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC12.68□□□□□ -0.38
SLC6A9P48067 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC12.68□□□□□ -0.38
SLC6A9P48067 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 SMAD2-203ENST00000402690 12075 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 HADH-202ENST00000403312 1752 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.68□□□□□ -0.38
SLC6A9P48067 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
SLC6A9P48067 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
SLC6A9P48067 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 AC090643.2-201ENST00000623442 2029 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.67□□□□□ -0.38
SLC6A9P48067 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 AL157996.1-201ENST00000624684 2299 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 MRVI1-201ENST00000423302 6126 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 RBM38-204ENST00000371219 760 ntTSL 2 BASIC12.67□□□□□ -0.38
SLC6A9P48067 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 AC026954.1-201ENST00000429771 1293 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 CHMP1AP1-201ENST00000445563 662 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC12.67□□□□□ -0.38
SLC6A9P48067 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.67□□□□□ -0.38
SLC6A9P48067 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.67□□□□□ -0.38
SLC6A9P48067 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 HNRNPA1P48-202ENST00000565308 961 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.67□□□□□ -0.38
SLC6A9P48067 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 E2F3P2-201ENST00000447755 1422 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 AC015818.8-201ENST00000587907 1519 ntBASIC12.67□□□□□ -0.38
SLC6A9P48067 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.67□□□□□ -0.38
SLC6A9P48067 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SLC6A9P48067 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC6A9P48067 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SLC6A9P48067 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC6A9P48067 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
SLC6A9P48067 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 LSS-211ENST00000522411 2523 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC6A9P48067 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SLC6A9P48067 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC6A9P48067 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.66□□□□□ -0.38
SLC6A9P48067 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC6A9P48067 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC12.66□□□□□ -0.38
SLC6A9P48067 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
SLC6A9P48067 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SLC6A9P48067 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
SLC6A9P48067 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms