Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF9P41273 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC15.29■□□□□ 0.04
TNFSF9P41273 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF9P41273 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TNFSF9P41273 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFSF9P41273 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 TEKT4P2-202ENST00000559466 1312 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 AC092506.1-202ENST00000401022 528 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 AC098934.1-203ENST00000442868 1262 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 FTLP1-201ENST00000449155 526 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFSF9P41273 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFSF9P41273 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC15.28■□□□□ 0.04
TNFSF9P41273 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
TNFSF9P41273 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 SIGLEC22P-201ENST00000599104 714 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC15.28■□□□□ 0.04
TNFSF9P41273 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 AC007881.3-201ENST00000608897 607 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 AC242376.2-201ENST00000619355 883 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC15.28■□□□□ 0.04
TNFSF9P41273 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
TNFSF9P41273 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC15.28■□□□□ 0.04
TNFSF9P41273 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 AC073869.1-201ENST00000415574 2762 ntBASIC15.28■□□□□ 0.04
TNFSF9P41273 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TNFSF9P41273 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFSF9P41273 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TNFSF9P41273 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF9P41273 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFSF9P41273 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFSF9P41273 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF9P41273 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 MIR33B-201ENST00000385104 96 ntBASIC15.27■□□□□ 0.04
TNFSF9P41273 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TNFSF9P41273 AL512306.1-201ENST00000432698 848 ntBASIC15.27■□□□□ 0.04
TNFSF9P41273 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.27■□□□□ 0.04
TNFSF9P41273 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.27■□□□□ 0.04
TNFSF9P41273 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFSF9P41273 RN7SL788P-201ENST00000460504 316 ntBASIC15.27■□□□□ 0.04
TNFSF9P41273 RN7SL81P-201ENST00000493781 261 ntBASIC15.27■□□□□ 0.04
TNFSF9P41273 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC15.27■□□□□ 0.04
TNFSF9P41273 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.27■□□□□ 0.04
TNFSF9P41273 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.27■□□□□ 0.04
TNFSF9P41273 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC15.27■□□□□ 0.04
TNFSF9P41273 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC15.27■□□□□ 0.04
TNFSF9P41273 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.27■□□□□ 0.03
TNFSF9P41273 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.27■□□□□ 0.03
TNFSF9P41273 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 AC061965.1-201ENST00000560524 1465 ntBASIC15.27■□□□□ 0.03
TNFSF9P41273 PKD1P5-201ENST00000532415 10291 ntBASIC15.27■□□□□ 0.03
TNFSF9P41273 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC15.27■□□□□ 0.03
TNFSF9P41273 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNFSF9P41273 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNFSF9P41273 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms