Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC14.52□□□□□ -0.09
FDFT1P37268 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.09
FDFT1P37268 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
FDFT1P37268 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.52□□□□□ -0.09
FDFT1P37268 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
FDFT1P37268 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
FDFT1P37268 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
FDFT1P37268 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 FAM90A7P-201ENST00000382628 1395 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 FAM90A23P-201ENST00000400136 1395 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 INVS-201ENST00000262456 2968 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 LINC00115-201ENST00000473798 1317 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.51□□□□□ -0.09
FDFT1P37268 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC14.51□□□□□ -0.09
FDFT1P37268 FAM21FP-201ENST00000426241 1131 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 Z93015.1-201ENST00000451718 390 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
FDFT1P37268 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 HLA-J-204ENST00000495278 958 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 GOLGA2P8-201ENST00000505201 779 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC005730.2-201ENST00000564549 1184 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC14.51□□□□□ -0.09
FDFT1P37268 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC010328.2-201ENST00000597698 1111 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC092299.1-201ENST00000632679 757 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 ABCD1P2-201ENST00000429313 1601 ntBASIC14.51□□□□□ -0.09
FDFT1P37268 ATP2B2-210ENST00000638646 3465 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
FDFT1P37268 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.51□□□□□ -0.09
FDFT1P37268 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.5□□□□□ -0.09
FDFT1P37268 RPL13AP3-202ENST00000494676 1473 ntBASIC14.5□□□□□ -0.09
FDFT1P37268 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC14.5□□□□□ -0.09
FDFT1P37268 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.5□□□□□ -0.09
FDFT1P37268 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC14.5□□□□□ -0.09
FDFT1P37268 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.5□□□□□ -0.09
FDFT1P37268 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.5□□□□□ -0.09
FDFT1P37268 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
FDFT1P37268 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms