Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 AC079336.7-201ENST00000623428 1078 ntBASIC14.38□□□□□ -0.11
XPAP23025 AC006453.1-201ENST00000636037 1257 ntBASIC14.38□□□□□ -0.11
XPAP23025 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.38□□□□□ -0.11
XPAP23025 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC14.38□□□□□ -0.11
XPAP23025 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
XPAP23025 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.37□□□□□ -0.11
XPAP23025 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC14.37□□□□□ -0.11
XPAP23025 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 SIAE-206ENST00000618733 1980 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC14.37□□□□□ -0.11
XPAP23025 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 AP000358.1-201ENST00000456260 156 ntBASIC14.37□□□□□ -0.11
XPAP23025 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 ALG1L13P-202ENST00000519320 584 ntBASIC14.37□□□□□ -0.11
XPAP23025 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 AC105129.2-201ENST00000559536 390 ntBASIC14.37□□□□□ -0.11
XPAP23025 AC026803.1-201ENST00000569130 274 ntBASIC14.37□□□□□ -0.11
XPAP23025 PHBP15-201ENST00000574228 665 ntBASIC14.37□□□□□ -0.11
XPAP23025 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.37□□□□□ -0.11
XPAP23025 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC14.37□□□□□ -0.11
XPAP23025 HPN-206ENST00000597419 1212 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 MEG3_2.1-201ENST00000611456 105 ntBASIC14.37□□□□□ -0.11
XPAP23025 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
XPAP23025 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.37□□□□□ -0.11
XPAP23025 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 AL590824.1-201ENST00000403828 1349 ntBASIC14.37□□□□□ -0.11
XPAP23025 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.37□□□□□ -0.11
XPAP23025 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
XPAP23025 AL805961.2-201ENST00000642139 4817 ntBASIC14.36□□□□□ -0.11
XPAP23025 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
XPAP23025 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 AC005912.2-201ENST00000619492 2400 ntBASIC14.36□□□□□ -0.11
XPAP23025 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC14.36□□□□□ -0.11
XPAP23025 MEX3B-202ENST00000558133 4333 ntBASIC14.36□□□□□ -0.11
XPAP23025 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
XPAP23025 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms