Protein–RNA interactions for Protein: P21912

SDHB, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, humanhuman

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHBP21912 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC13.94□□□□□ -0.18
SDHBP21912 RN7SL524P-201ENST00000581152 300 ntBASIC13.94□□□□□ -0.18
SDHBP21912 AC023421.2-201ENST00000589510 313 ntTSL 5 BASIC13.94□□□□□ -0.18
SDHBP21912 AC005786.2-201ENST00000592368 369 ntTSL 3 BASIC13.94□□□□□ -0.18
SDHBP21912 ZNF671-203ENST00000596939 977 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 Metazoa_SRP.144-201ENST00000617007 311 ntBASIC13.94□□□□□ -0.18
SDHBP21912 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHBP21912 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
SDHBP21912 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHBP21912 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHBP21912 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.94□□□□□ -0.18
SDHBP21912 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
SDHBP21912 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 AK6-202ENST00000380822 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 AC041040.2-201ENST00000622926 2899 ntBASIC13.93□□□□□ -0.18
SDHBP21912 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 AC106827.1-201ENST00000366454 431 ntBASIC13.93□□□□□ -0.18
SDHBP21912 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 PITHD1-202ENST00000374524 1292 ntTSL 3 BASIC13.93□□□□□ -0.18
SDHBP21912 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 CDCA4P4-201ENST00000435216 680 ntBASIC13.93□□□□□ -0.18
SDHBP21912 AC092896.1-201ENST00000465850 380 ntBASIC13.93□□□□□ -0.18
SDHBP21912 RN7SL128P-201ENST00000467883 305 ntBASIC13.93□□□□□ -0.18
SDHBP21912 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 KRT8P2-201ENST00000556193 944 ntBASIC13.93□□□□□ -0.18
SDHBP21912 AC023968.2-201ENST00000560593 1049 ntBASIC13.93□□□□□ -0.18
SDHBP21912 AC140658.4-201ENST00000561990 352 ntBASIC13.93□□□□□ -0.18
SDHBP21912 MYMX-201ENST00000573382 817 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 AC073578.2-201ENST00000618927 464 ntTSL 4 BASIC13.93□□□□□ -0.18
SDHBP21912 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SDHBP21912 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 AC009090.5-201ENST00000624886 2285 ntBASIC13.93□□□□□ -0.18
SDHBP21912 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SDHBP21912 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.93□□□□□ -0.18
SDHBP21912 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SDHBP21912 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 AC127383.1-201ENST00000444697 1800 ntBASIC13.92□□□□□ -0.18
SDHBP21912 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 AC010327.5-201ENST00000586923 3061 ntBASIC13.92□□□□□ -0.18
SDHBP21912 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHBP21912 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 AC062028.1-201ENST00000536743 1422 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHBP21912 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SDHBP21912 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.92□□□□□ -0.18
SDHBP21912 ST20-AS1-201ENST00000560255 4223 ntBASIC13.92□□□□□ -0.18
SDHBP21912 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHBP21912 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.92□□□□□ -0.18
SDHBP21912 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms