Protein–RNA interactions for Protein: P20749

BCL3, B-cell lymphoma 3 protein, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCL3P20749 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
BCL3P20749 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
BCL3P20749 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC12.12□□□□□ -0.47
BCL3P20749 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
BCL3P20749 SMIM11A-203ENST00000399299 1033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 KRT18P36-201ENST00000411618 1276 ntBASIC12.12□□□□□ -0.47
BCL3P20749 HMGA1P1-201ENST00000415560 1062 ntBASIC12.12□□□□□ -0.47
BCL3P20749 AC005014.1-201ENST00000432006 2976 ntBASIC12.12□□□□□ -0.47
BCL3P20749 OR2R1P-201ENST00000441404 914 ntBASIC12.12□□□□□ -0.47
BCL3P20749 AC021723.1-201ENST00000486306 515 ntBASIC12.12□□□□□ -0.47
BCL3P20749 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
BCL3P20749 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.12□□□□□ -0.47
BCL3P20749 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC12.12□□□□□ -0.47
BCL3P20749 AC005730.2-201ENST00000564549 1184 ntBASIC12.12□□□□□ -0.47
BCL3P20749 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 AC133552.6-201ENST00000613406 534 ntBASIC12.12□□□□□ -0.47
BCL3P20749 AC009542.2-202ENST00000619004 1067 ntBASIC12.12□□□□□ -0.47
BCL3P20749 AL035252.4-201ENST00000624174 288 ntBASIC12.12□□□□□ -0.47
BCL3P20749 DDX5-235ENST00000630471 473 ntTSL 4 BASIC12.12□□□□□ -0.47
BCL3P20749 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
BCL3P20749 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.12□□□□□ -0.47
BCL3P20749 AC007952.5-201ENST00000572818 1486 ntBASIC12.12□□□□□ -0.47
BCL3P20749 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
BCL3P20749 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 AC107918.4-201ENST00000641966 3141 ntBASIC12.12□□□□□ -0.47
BCL3P20749 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.12□□□□□ -0.47
BCL3P20749 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
BCL3P20749 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
BCL3P20749 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
BCL3P20749 AC018629.1-201ENST00000623381 1736 ntBASIC12.11□□□□□ -0.47
BCL3P20749 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.11□□□□□ -0.47
BCL3P20749 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
BCL3P20749 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
BCL3P20749 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
BCL3P20749 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC12.11□□□□□ -0.47
BCL3P20749 MTX1P1-201ENST00000440904 838 ntBASIC12.11□□□□□ -0.47
BCL3P20749 HSPB1P2-201ENST00000448722 546 ntBASIC12.11□□□□□ -0.47
BCL3P20749 GPR53P-205ENST00000457298 1084 ntBASIC12.11□□□□□ -0.47
BCL3P20749 SCARNA21-201ENST00000517026 139 ntBASIC12.11□□□□□ -0.47
BCL3P20749 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 AC010328.2-201ENST00000597698 1111 ntBASIC12.11□□□□□ -0.47
BCL3P20749 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.11□□□□□ -0.47
BCL3P20749 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC12.11□□□□□ -0.47
BCL3P20749 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.11□□□□□ -0.47
BCL3P20749 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.11□□□□□ -0.47
BCL3P20749 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
BCL3P20749 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms