Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VCLP18206 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VCLP18206 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VCLP18206 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.39□□□□□ -0.11
VCLP18206 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VCLP18206 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC011498.7-201ENST00000624986 2027 ntBASIC14.38□□□□□ -0.11
VCLP18206 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC018735.1-201ENST00000437208 1502 ntBASIC14.38□□□□□ -0.11
VCLP18206 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
VCLP18206 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 AC011742.3-201ENST00000439053 820 ntBASIC14.38□□□□□ -0.11
VCLP18206 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.38□□□□□ -0.11
VCLP18206 RPL18P13-201ENST00000478088 569 ntBASIC14.38□□□□□ -0.11
VCLP18206 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.38□□□□□ -0.11
VCLP18206 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.38□□□□□ -0.11
VCLP18206 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.38□□□□□ -0.11
VCLP18206 SORD2P-201ENST00000558556 1069 ntBASIC14.38□□□□□ -0.11
VCLP18206 MIR4783-201ENST00000580343 82 ntBASIC14.38□□□□□ -0.11
VCLP18206 AC005962.1-201ENST00000584100 773 ntBASIC14.38□□□□□ -0.11
VCLP18206 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 MIR6787-201ENST00000616675 61 ntBASIC14.38□□□□□ -0.11
VCLP18206 AC022748.3-201ENST00000621828 275 ntBASIC14.38□□□□□ -0.11
VCLP18206 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC068760.1-201ENST00000493579 1953 ntBASIC14.38□□□□□ -0.11
VCLP18206 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
VCLP18206 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC14.38□□□□□ -0.11
VCLP18206 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VCLP18206 AC138028.6-201ENST00000616106 1482 ntBASIC14.38□□□□□ -0.11
VCLP18206 AC020910.6-201ENST00000623084 1459 ntBASIC14.38□□□□□ -0.11
VCLP18206 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
VCLP18206 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 AL118506.1-201ENST00000601296 3082 ntBASIC14.37□□□□□ -0.11
VCLP18206 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
VCLP18206 AGER-203ENST00000375065 665 ntTSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
VCLP18206 AL645933.1-201ENST00000440087 609 ntBASIC14.37□□□□□ -0.11
VCLP18206 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC14.37□□□□□ -0.11
VCLP18206 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.37□□□□□ -0.11
VCLP18206 AC027237.1-201ENST00000560942 655 ntBASIC14.37□□□□□ -0.11
VCLP18206 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.37□□□□□ -0.11
VCLP18206 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.37□□□□□ -0.11
VCLP18206 AC090164.2-201ENST00000611487 516 ntBASIC14.37□□□□□ -0.11
VCLP18206 AC133540.1-201ENST00000620845 1019 ntBASIC14.37□□□□□ -0.11
VCLP18206 GPR182-203ENST00000622922 591 ntBASIC14.37□□□□□ -0.11
VCLP18206 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.37□□□□□ -0.11
VCLP18206 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
VCLP18206 Z98259.2-201ENST00000641583 609 ntBASIC14.37□□□□□ -0.11
VCLP18206 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.37□□□□□ -0.11
VCLP18206 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.9 ms