Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC12.88□□□□□ -0.35
FREM3P0C091 AL512306.1-201ENST00000432698 848 ntBASIC12.88□□□□□ -0.35
FREM3P0C091 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC12.88□□□□□ -0.35
FREM3P0C091 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 NEU3-207ENST00000534628 746 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.88□□□□□ -0.35
FREM3P0C091 AC093752.3-201ENST00000567343 901 ntBASIC12.88□□□□□ -0.35
FREM3P0C091 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.88□□□□□ -0.35
FREM3P0C091 BEND3P1-201ENST00000421591 1944 ntBASIC12.88□□□□□ -0.35
FREM3P0C091 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
FREM3P0C091 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
FREM3P0C091 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
FREM3P0C091 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 PITRM1-206ENST00000451104 3183 ntTSL 2 BASIC12.87□□□□□ -0.35
FREM3P0C091 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC12.87□□□□□ -0.35
FREM3P0C091 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC12.87□□□□□ -0.35
FREM3P0C091 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.87□□□□□ -0.35
FREM3P0C091 PPP1R2P4-201ENST00000424051 595 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC12.87□□□□□ -0.35
FREM3P0C091 CHCHD2P9-201ENST00000461726 456 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC12.87□□□□□ -0.35
FREM3P0C091 RN7SL530P-201ENST00000485097 298 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 IQSEC3P1-201ENST00000538799 536 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.87□□□□□ -0.35
FREM3P0C091 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
FREM3P0C091 AC242376.1-201ENST00000559033 726 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 MIR5572-201ENST00000583188 137 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.87□□□□□ -0.35
FREM3P0C091 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 LINC00115-201ENST00000473798 1317 ntBASIC12.87□□□□□ -0.35
FREM3P0C091 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 DUT-208ENST00000559540 1441 ntTSL 2 BASIC12.87□□□□□ -0.35
FREM3P0C091 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
FREM3P0C091 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
FREM3P0C091 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC12.87□□□□□ -0.35
FREM3P0C091 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
FREM3P0C091 MPV17-204ENST00000399052 749 ntTSL 4 BASIC12.86□□□□□ -0.35
FREM3P0C091 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC12.86□□□□□ -0.35
FREM3P0C091 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms