Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
RETP07949 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.33□□□□□ -0.12
RETP07949 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RETP07949 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RETP07949 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
RETP07949 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
RETP07949 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RETP07949 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
RETP07949 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 VENTXP4-201ENST00000449029 958 ntBASIC14.32□□□□□ -0.12
RETP07949 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 AC026470.1-201ENST00000478038 846 ntBASIC14.32□□□□□ -0.12
RETP07949 CISD2-202ENST00000503643 808 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC14.32□□□□□ -0.12
RETP07949 FTLP5-201ENST00000586853 534 ntBASIC14.32□□□□□ -0.12
RETP07949 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC14.32□□□□□ -0.12
RETP07949 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC14.32□□□□□ -0.12
RETP07949 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.32□□□□□ -0.12
RETP07949 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
RETP07949 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
RETP07949 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
RETP07949 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
RETP07949 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 AC006372.4-201ENST00000624122 1543 ntBASIC14.31□□□□□ -0.12
RETP07949 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RETP07949 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC14.31□□□□□ -0.12
RETP07949 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RETP07949 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC14.31□□□□□ -0.12
RETP07949 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 PRKAR2A-AS1-203ENST00000431705 592 ntTSL 4 BASIC14.31□□□□□ -0.12
RETP07949 HLA-DPA2-205ENST00000433582 733 ntBASIC14.31□□□□□ -0.12
RETP07949 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.31□□□□□ -0.12
RETP07949 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC14.31□□□□□ -0.12
RETP07949 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
RETP07949 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 ABHD17AP9-201ENST00000561925 548 ntBASIC14.31□□□□□ -0.12
RETP07949 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 PTOV1-AS2-203ENST00000601893 719 ntTSL 4 BASIC14.31□□□□□ -0.12
RETP07949 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RETP07949 MIR6816-201ENST00000620368 66 ntBASIC14.31□□□□□ -0.12
RETP07949 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC14.31□□□□□ -0.12
RETP07949 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.31□□□□□ -0.12
RETP07949 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
RETP07949 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC14.31□□□□□ -0.12
RETP07949 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
RETP07949 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms