Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC13.85□□□□□ -0.19
KRT6AP02538 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.85□□□□□ -0.19
KRT6AP02538 AC022217.1-201ENST00000521069 738 ntBASIC13.85□□□□□ -0.19
KRT6AP02538 KRT17P8-201ENST00000540749 863 ntBASIC13.85□□□□□ -0.19
KRT6AP02538 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC13.85□□□□□ -0.19
KRT6AP02538 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 AL162274.1-201ENST00000617191 1098 ntBASIC13.85□□□□□ -0.19
KRT6AP02538 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 RPL35-206ENST00000629845 340 ntTSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 Z98259.2-201ENST00000641583 609 ntBASIC13.85□□□□□ -0.19
KRT6AP02538 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.85□□□□□ -0.19
KRT6AP02538 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.85□□□□□ -0.19
KRT6AP02538 GOLGA8EP-201ENST00000530246 1959 ntBASIC13.85□□□□□ -0.19
KRT6AP02538 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
KRT6AP02538 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
KRT6AP02538 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC13.85□□□□□ -0.19
KRT6AP02538 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
KRT6AP02538 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
KRT6AP02538 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.84□□□□□ -0.19
KRT6AP02538 HMGA1P1-201ENST00000415560 1062 ntBASIC13.84□□□□□ -0.19
KRT6AP02538 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.84□□□□□ -0.19
KRT6AP02538 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
KRT6AP02538 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.84□□□□□ -0.19
KRT6AP02538 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.84□□□□□ -0.19
KRT6AP02538 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC13.84□□□□□ -0.19
KRT6AP02538 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC13.84□□□□□ -0.19
KRT6AP02538 AC012645.4-201ENST00000610691 1061 ntBASIC13.84□□□□□ -0.19
KRT6AP02538 AC133540.1-201ENST00000620845 1019 ntBASIC13.84□□□□□ -0.19
KRT6AP02538 AL162426.1-201ENST00000624141 743 ntBASIC13.84□□□□□ -0.19
KRT6AP02538 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 MEAF6-203ENST00000373074 2005 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 AC144522.1-201ENST00000625111 1658 ntBASIC13.84□□□□□ -0.19
KRT6AP02538 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 AL590824.1-201ENST00000403828 1349 ntBASIC13.84□□□□□ -0.19
KRT6AP02538 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.84□□□□□ -0.19
KRT6AP02538 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
KRT6AP02538 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
KRT6AP02538 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
KRT6AP02538 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
KRT6AP02538 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC13.83□□□□□ -0.19
KRT6AP02538 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
KRT6AP02538 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
KRT6AP02538 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
KRT6AP02538 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
KRT6AP02538 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRT6AP02538 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
KRT6AP02538 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRT6AP02538 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
KRT6AP02538 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
KRT6AP02538 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRT6AP02538 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
KRT6AP02538 AC007952.5-201ENST00000572818 1486 ntBASIC13.83□□□□□ -0.2
KRT6AP02538 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms