Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 IQSEC3P1-201ENST00000538799 536 ntBASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC073352.2-201ENST00000609385 439 ntBASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 COX6A1P2-201ENST00000620597 330 ntBASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC012617.1-204ENST00000586340 2305 ntBASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 USP4-203ENST00000415188 1454 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AL807761.2-201ENST00000422849 729 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AC098935.1-201ENST00000446057 611 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 DUTP3-201ENST00000450025 415 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 RN7SL181P-201ENST00000462921 277 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AC093752.3-201ENST00000567343 901 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 WDR7-208ENST00000589935 544 ntTSL 4 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AL022334.2-201ENST00000610000 484 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 FXYD6-FXYD2-202ENST00000614497 634 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 MIR6727-201ENST00000620702 65 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 AL591471.1-201ENST00000621855 229 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 STRCP1-201ENST00000509801 5328 ntBASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
NPIPA3F8WFD2 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC12.98□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms