Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 BX324167.2-201ENST00000623717 3316 ntBASIC13.42□□□□□ -0.26
IFT52Q9Y366 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.42□□□□□ -0.26
IFT52Q9Y366 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 PPP2R1A-201ENST00000322088 5380 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
IFT52Q9Y366 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
IFT52Q9Y366 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 ARHGEF33-202ENST00000409978 4484 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 MIR326-201ENST00000362220 95 ntBASIC13.41□□□□□ -0.26
IFT52Q9Y366 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 HOMER2P2-201ENST00000451621 847 ntBASIC13.41□□□□□ -0.26
IFT52Q9Y366 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AP005018.1-201ENST00000525475 301 ntBASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC079316.1-201ENST00000548397 411 ntBASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 IGHV3-72-202ENST00000621503 303 ntBASIC13.41□□□□□ -0.26
IFT52Q9Y366 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 MIR193BHG-211ENST00000641433 5365 ntBASIC13.41□□□□□ -0.26
IFT52Q9Y366 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
IFT52Q9Y366 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
IFT52Q9Y366 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.4□□□□□ -0.26
IFT52Q9Y366 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
IFT52Q9Y366 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms