Protein–RNA interactions for Protein: Q9ULE3

DENND2A, DENN domain-containing protein 2A, humanhuman

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND2AQ9ULE3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
DENND2AQ9ULE3 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 SARS-202ENST00000369923 1882 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AC012362.1-201ENST00000434906 739 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 HPX-213ENST00000615166 826 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 LINC00244-201ENST00000625073 613 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 UBE2V2-205ENST00000521346 1322 ntTSL 3 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AL928921.2-201ENST00000641325 2442 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AL161772.1-201ENST00000610494 4412 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 TBC1D27-202ENST00000424239 1573 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 LINC02486-201ENST00000604157 3000 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 AC019109.1-201ENST00000401725 1874 ntBASIC17.1■□□□□ 0.33
DENND2AQ9ULE3 TKT-201ENST00000296289 1931 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC016397.2-201ENST00000624848 1985 ntBASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC004837.1-201ENST00000446267 564 ntBASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 PDXDC2P-206ENST00000534700 1315 ntBASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC138761.6-201ENST00000583997 1423 ntBASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 ODCP-201ENST00000459650 1639 ntBASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 AC068760.1-201ENST00000493579 1953 ntBASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 ADORA2A-AS1-201ENST00000326341 2557 ntTSL 5 BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
DENND2AQ9ULE3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms