Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AL023803.2-201ENST00000620080 638 ntBASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 SNRNP27-201ENST00000244227 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 MED16-202ENST00000312090 3229 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
RSPO3Q9BXY4 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AL139158.3-201ENST00000641212 1562 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 NIT1-202ENST00000368008 2081 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 PCDHB18P-202ENST00000526308 3197 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 CD34-203ENST00000367036 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 NDUFAB1P1-201ENST00000404262 460 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AL022334.2-201ENST00000610000 484 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 THAP4-206ENST00000612200 969 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 AC133552.6-201ENST00000613406 534 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ZNF493-208ENST00000599461 1769 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 POC5-202ENST00000428202 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 MARK2P16-201ENST00000605714 1723 ntBASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
RSPO3Q9BXY4 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 AC036108.2-201ENST00000566974 2562 ntTSL 2 BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 EGLN3-205ENST00000547327 2849 ntBASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 PIGG-217ENST00000509768 3121 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
RSPO3Q9BXY4 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms