Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC12.06□□□□□ -0.48
HDHD3Q9BSH5 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AL118506.1-201ENST00000601296 3082 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 DDC-214ENST00000622873 1839 ntTSL 3 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 TBC1D24-201ENST00000293970 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AP002761.4-201ENST00000565433 3361 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 BEND3P3-201ENST00000611030 2440 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AL391647.1-201ENST00000395664 511 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 MIR1202-201ENST00000408529 83 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AL645933.1-201ENST00000440087 609 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 CRB3P1-201ENST00000449338 276 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 RN7SL752P-201ENST00000463779 287 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PPY2P-201ENST00000582808 702 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 REXO1L6P-201ENST00000603433 1515 ntBASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC12.05□□□□□ -0.48
HDHD3Q9BSH5 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 LAP3P2-201ENST00000454686 1454 ntBASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
HDHD3Q9BSH5 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms