Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 STUB1-204ENST00000564370 875 ntTSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 AL031713.1-201ENST00000564813 661 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 AF254983.2-201ENST00000612331 135 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 AC051619.9-201ENST00000623237 597 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 AC087386.2-201ENST00000623212 4637 ntBASIC13.52□□□□□ -0.25
TM9SF4Q92544 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TM9SF4Q92544 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.52□□□□□ -0.25
TM9SF4Q92544 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PPT1-213ENST00000641319 2388 ntBASIC13.51□□□□□ -0.25
TM9SF4Q92544 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 RPL17P11-201ENST00000417593 544 ntBASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC006122.1-201ENST00000493323 440 ntBASIC13.51□□□□□ -0.25
TM9SF4Q92544 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 CFL1-214ENST00000534769 758 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC131206.1-201ENST00000538078 1211 ntBASIC13.51□□□□□ -0.25
TM9SF4Q92544 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 LINC01783-202ENST00000614408 828 ntBASIC13.51□□□□□ -0.25
TM9SF4Q92544 BX284668.2-205ENST00000619677 828 ntBASIC13.51□□□□□ -0.25
TM9SF4Q92544 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.51□□□□□ -0.25
TM9SF4Q92544 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TM9SF4Q92544 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC13.5□□□□□ -0.25
TM9SF4Q92544 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TM9SF4Q92544 AC144522.1-201ENST00000625111 1658 ntBASIC13.5□□□□□ -0.25
TM9SF4Q92544 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TM9SF4Q92544 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TM9SF4Q92544 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TM9SF4Q92544 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TM9SF4Q92544 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms