Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
LRRC28Q86X40 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.76□□□□□ -0.37
LRRC28Q86X40 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 GLIS3-201ENST00000324333 6667 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 STX1A-203ENST00000395155 783 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 FO681548.1-201ENST00000455617 1132 ntBASIC12.75□□□□□ -0.37
LRRC28Q86X40 AC119751.2-201ENST00000504529 210 ntBASIC12.75□□□□□ -0.37
LRRC28Q86X40 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 MIR4259-201ENST00000584466 101 ntBASIC12.75□□□□□ -0.37
LRRC28Q86X40 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 AGAP12P-201ENST00000585227 2359 ntBASIC12.75□□□□□ -0.37
LRRC28Q86X40 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 AC244669.2-201ENST00000612320 853 ntBASIC12.75□□□□□ -0.37
LRRC28Q86X40 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 RHOXF1P1-202ENST00000635473 501 ntBASIC12.75□□□□□ -0.37
LRRC28Q86X40 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
LRRC28Q86X40 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC12.75□□□□□ -0.37
LRRC28Q86X40 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 HYOU1-220ENST00000617285 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
LRRC28Q86X40 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC12.74□□□□□ -0.37
LRRC28Q86X40 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms