Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AC144522.1-201ENST00000625111 1658 ntBASIC13.3□□□□□ -0.28
REEP3Q6NUK4 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
REEP3Q6NUK4 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AC079178.1-201ENST00000420915 656 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 KLF2P1-201ENST00000447438 1042 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 MIR4783-201ENST00000580343 82 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AC133540.1-201ENST00000620845 1019 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AL023775.1-201ENST00000454907 1746 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SHMT1P1-201ENST00000419974 1312 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.29□□□□□ -0.28
REEP3Q6NUK4 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
REEP3Q6NUK4 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
REEP3Q6NUK4 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms