Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 AC126335.2-201ENST00000623362 4637 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 AC006987.1-201ENST00000413610 527 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 DUX4L50-201ENST00000455245 715 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 KRT8P13-201ENST00000463294 1010 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 MIR4538-201ENST00000581377 78 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 NCLP1-201ENST00000445357 1963 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 AC068760.1-201ENST00000493579 1953 ntBASIC12.43□□□□□ -0.42
FAM27BQ5VT28 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
FAM27BQ5VT28 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 AC116345.2-201ENST00000512837 523 ntBASIC12.42□□□□□ -0.42
FAM27BQ5VT28 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 CMC2-204ENST00000562713 573 ntTSL 3 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 CMC2-209ENST00000565108 399 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 AC243960.2-201ENST00000600996 747 ntBASIC12.42□□□□□ -0.42
FAM27BQ5VT28 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
FAM27BQ5VT28 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms