Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 AC012362.1-201ENST00000434906 739 ntBASIC17■□□□□ 0.31
RFX7Q2KHR2 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17■□□□□ 0.31
RFX7Q2KHR2 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC17■□□□□ 0.31
RFX7Q2KHR2 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
RFX7Q2KHR2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC17■□□□□ 0.31
RFX7Q2KHR2 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CCNB2-201ENST00000288207 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 ABCD1P2-201ENST00000429313 1601 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 RN7SKP109-201ENST00000410592 316 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 AC114501.1-201ENST00000445949 172 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 RNA5SP417-201ENST00000516459 108 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 AL021707.6-201ENST00000609212 491 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 AC006372.4-201ENST00000624122 1543 ntBASIC16.99■□□□□ 0.31
RFX7Q2KHR2 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
RFX7Q2KHR2 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ARHGAP23P1-201ENST00000562773 1937 ntBASIC16.98■□□□□ 0.31
RFX7Q2KHR2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 VEGFB-202ENST00000426086 979 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 KRT18P66-201ENST00000452970 1269 ntBASIC16.98■□□□□ 0.31
RFX7Q2KHR2 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 CR383656.3-201ENST00000551315 183 ntBASIC16.98■□□□□ 0.31
RFX7Q2KHR2 RN7SL470P-201ENST00000583069 259 ntBASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 AC025271.4-201ENST00000621477 1726 ntBASIC16.98■□□□□ 0.31
RFX7Q2KHR2 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
RFX7Q2KHR2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms