Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 AL357563.1-201ENST00000404728 395 ntBASIC16.63■□□□□ 0.25
IRX3P78415 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 REEP5-205ENST00000504247 480 ntTSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 LINC01481-204ENST00000550216 494 ntTSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.63■□□□□ 0.25
IRX3P78415 RN7SL665P-201ENST00000578793 300 ntBASIC16.63■□□□□ 0.25
IRX3P78415 AC138466.4-201ENST00000623965 852 ntBASIC16.63■□□□□ 0.25
IRX3P78415 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC16.63■□□□□ 0.25
IRX3P78415 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 GALC-206ENST00000544807 2528 ntTSL 2 BASIC16.63■□□□□ 0.25
IRX3P78415 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
IRX3P78415 PPT1-215ENST00000641471 2368 ntBASIC16.63■□□□□ 0.25
IRX3P78415 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 AC091951.1-201ENST00000512854 2465 ntBASIC16.62■□□□□ 0.25
IRX3P78415 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 LAP3P2-201ENST00000454686 1454 ntBASIC16.62■□□□□ 0.25
IRX3P78415 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 AC005562.1-201ENST00000583030 3219 ntBASIC16.62■□□□□ 0.25
IRX3P78415 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.62■□□□□ 0.25
IRX3P78415 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC16.62■□□□□ 0.25
IRX3P78415 MIR1227-201ENST00000408484 88 ntBASIC16.62■□□□□ 0.25
IRX3P78415 LINC01868-201ENST00000414965 562 ntTSL 4 BASIC16.62■□□□□ 0.25
IRX3P78415 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 AC098934.1-203ENST00000442868 1262 ntBASIC16.62■□□□□ 0.25
IRX3P78415 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC16.62■□□□□ 0.25
IRX3P78415 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 AREG-202ENST00000502307 956 ntTSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 EMP2-203ENST00000536829 781 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 AL109954.1-202ENST00000564051 2148 ntBASIC16.62■□□□□ 0.25
IRX3P78415 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.62■□□□□ 0.25
IRX3P78415 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC16.62■□□□□ 0.25
IRX3P78415 AC009145.4-201ENST00000625119 1294 ntBASIC16.62■□□□□ 0.25
IRX3P78415 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC16.62■□□□□ 0.25
IRX3P78415 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC16.62■□□□□ 0.25
IRX3P78415 FTX-216ENST00000638985 1367 ntTSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IRX3P78415 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.62■□□□□ 0.25
IRX3P78415 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IRX3P78415 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC16.61■□□□□ 0.25
IRX3P78415 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 NDUFS7-203ENST00000414651 841 ntTSL 5 BASIC16.61■□□□□ 0.25
IRX3P78415 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 AC018638.5-201ENST00000450885 754 ntBASIC16.61■□□□□ 0.25
IRX3P78415 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC16.61■□□□□ 0.25
IRX3P78415 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.61■□□□□ 0.25
IRX3P78415 AC005586.2-201ENST00000563946 837 ntBASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms