Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 AC015910.1-201ENST00000579400 975 ntBASIC12.42□□□□□ -0.42
UBA52P62987 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.42□□□□□ -0.42
UBA52P62987 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC12.42□□□□□ -0.42
UBA52P62987 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 PRKN-211ENST00000615065 261 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 AP005019.2-201ENST00000615104 511 ntBASIC12.42□□□□□ -0.42
UBA52P62987 PPA1-206ENST00000625364 644 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 MEX3B-202ENST00000558133 4333 ntBASIC12.42□□□□□ -0.42
UBA52P62987 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 AHCYP2-201ENST00000430630 1300 ntBASIC12.41□□□□□ -0.42
UBA52P62987 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 AGGF1P1-201ENST00000509500 2073 ntBASIC12.41□□□□□ -0.42
UBA52P62987 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CSPG4P11-201ENST00000560634 4910 ntBASIC12.41□□□□□ -0.42
UBA52P62987 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.41□□□□□ -0.42
UBA52P62987 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 AL133267.1-201ENST00000398220 340 ntBASIC12.41□□□□□ -0.42
UBA52P62987 AC092506.1-202ENST00000401022 528 ntBASIC12.41□□□□□ -0.42
UBA52P62987 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 BTBD6P1-201ENST00000412176 1267 ntBASIC12.41□□□□□ -0.42
UBA52P62987 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 KCNMA1-216ENST00000457953 3976 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 AC078819.1-201ENST00000547454 765 ntBASIC12.41□□□□□ -0.42
UBA52P62987 AC012085.1-201ENST00000548270 765 ntBASIC12.41□□□□□ -0.42
UBA52P62987 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC12.41□□□□□ -0.42
UBA52P62987 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC12.41□□□□□ -0.42
UBA52P62987 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
UBA52P62987 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC12.41□□□□□ -0.42
UBA52P62987 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.41□□□□□ -0.42
UBA52P62987 RIOK3-203ENST00000577501 1904 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
UBA52P62987 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBA52P62987 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBA52P62987 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBA52P62987 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBA52P62987 TMC8-201ENST00000318430 4411 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
UBA52P62987 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC12.4□□□□□ -0.42
UBA52P62987 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
UBA52P62987 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms